Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY84723.1 | SDY84735.1 | SAMN05444340_12117 | SAMN05444340_12118 | Type III restriction enzyme, res subunit. | DNA-directed RNA polymerase specialized sigma subunit. | 0.468 |
SDY84723.1 | SDY84758.1 | SAMN05444340_12117 | SAMN05444340_12119 | Type III restriction enzyme, res subunit. | Transglycosylase SLT domain-containing protein. | 0.468 |
SDY84723.1 | SDY84776.1 | SAMN05444340_12117 | SAMN05444340_12120 | Type III restriction enzyme, res subunit. | Hypothetical protein. | 0.411 |
SDY84735.1 | SDY84723.1 | SAMN05444340_12118 | SAMN05444340_12117 | DNA-directed RNA polymerase specialized sigma subunit. | Type III restriction enzyme, res subunit. | 0.468 |
SDY84735.1 | SDY84758.1 | SAMN05444340_12118 | SAMN05444340_12119 | DNA-directed RNA polymerase specialized sigma subunit. | Transglycosylase SLT domain-containing protein. | 0.773 |
SDY84735.1 | SDY84776.1 | SAMN05444340_12118 | SAMN05444340_12120 | DNA-directed RNA polymerase specialized sigma subunit. | Hypothetical protein. | 0.664 |
SDY84758.1 | SDY84723.1 | SAMN05444340_12119 | SAMN05444340_12117 | Transglycosylase SLT domain-containing protein. | Type III restriction enzyme, res subunit. | 0.468 |
SDY84758.1 | SDY84735.1 | SAMN05444340_12119 | SAMN05444340_12118 | Transglycosylase SLT domain-containing protein. | DNA-directed RNA polymerase specialized sigma subunit. | 0.773 |
SDY84758.1 | SDY84776.1 | SAMN05444340_12119 | SAMN05444340_12120 | Transglycosylase SLT domain-containing protein. | Hypothetical protein. | 0.664 |
SDY84776.1 | SDY84723.1 | SAMN05444340_12120 | SAMN05444340_12117 | Hypothetical protein. | Type III restriction enzyme, res subunit. | 0.411 |
SDY84776.1 | SDY84735.1 | SAMN05444340_12120 | SAMN05444340_12118 | Hypothetical protein. | DNA-directed RNA polymerase specialized sigma subunit. | 0.664 |
SDY84776.1 | SDY84758.1 | SAMN05444340_12120 | SAMN05444340_12119 | Hypothetical protein. | Transglycosylase SLT domain-containing protein. | 0.664 |