STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY93309.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
SDY93350.1
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.954
SDY93287.1
Phage terminase, small subunit, putative, P27 family.
 
     0.882
SDY93329.1
Phage terminase, small subunit, putative, P27 family.
 
     0.880
SDY93296.1
Hypothetical protein.
       0.773
SDY96691.1
Hypothetical protein.
  
     0.682
SDY96710.1
Site-specific DNA recombinase.
  
     0.680
SDY93266.1
Site-specific DNA recombinase.
 
     0.648
SDX87545.1
Polysaccharide export outer membrane protein.
  
     0.425
SDY82221.1
cation:H+ antiporter.
  
     0.421
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.