STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP5F1AATP synthase F1 subunit alpha. (553 aa)    
Predicted Functional Partners:
ATP5PD
ATP synthase peripheral stalk subunit d.
   
 0.999
KDM6A
Lysine demethylase 6A.
  
 0.999
ENSLCOP00000003662
annotation not available
  
 0.999
ATP5MG
ATP synthase membrane subunit g.
   
 0.999
ATP5ME
ATP synthase membrane subunit e.
   
 0.999
ATP6V0C
ATPase H+ transporting V0 subunit c.
  
 0.999
ATP5F1E
ATP synthase F1 subunit epsilon.
   
 0.999
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 0.999
ATP5F1C
ATP synthase F1 subunit gamma.
 
 0.999
CUNH17orf80
Chromosome unknown C17orf80 homolog.
   
 0.999
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.