STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI3ERI1 exoribonuclease family member 3. (257 aa)    
Predicted Functional Partners:
UTP4
UTP4 small subunit processome component.
   
  
 0.712
WDR36
WD repeat domain 36.
   
    0.648
PWP2
PWP2 small subunit processome component.
   
    0.634
PUM3
Pumilio RNA binding family member 3.
   
    0.610
UTP25
UTP25 small subunit processor component.
   
    0.604
SPCS2
Signal peptidase complex subunit 2.
      
 0.577
TRAPPC4
Trafficking protein particle complex 4.
      
 0.574
TBL3
Transducin beta like 3.
   
    0.566
ORC2
Origin recognition complex subunit 2.
      
 0.566
WDR3
WD repeat domain 3.
   
    0.564
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.