STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOCMyocilin. (462 aa)    
Predicted Functional Partners:
FBN1
Fibrillin 1.
   
 
 0.602
GNB1
G protein subunit beta 1.
    
 
 0.589
WDR36
WD repeat domain 36.
      
 0.577
OPTN
Optineurin.
      
 0.563
CYP1B1
Cytochrome P450 family 1 subfamily B member 1.
      
 0.560
OPTC
Opticin.
    
 0.499
LINGO1
Leucine rich repeat and Ig domain containing 1.
    
 0.499
TENM4
Teneurin transmembrane protein 4.
    
 
 0.430
IFT140
Intraflagellar transport 140.
      
 0.422
PALB2
Partner and localizer of BRCA2.
      
 0.422
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.