Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCOP00000001351annotation not available (291 aa)    
Predicted Functional Partners:
CDC20
Cell division cycle 20.
   
 0.997
MAD2L1
Mitotic arrest deficient 2 like 1.
   
 0.997
ENSLCOP00000014119
annotation not available
   
 0.996
PLK1
Polo like kinase 1.
   
 0.995
NEK2
NIMA related kinase 2.
   
 0.993
BUB3
BUB3 mitotic checkpoint protein.
   
 0.993
CDC23
Cell division cycle 23.
    
 0.990
CDC27
Cell division cycle 27.
    
 0.989
NDC80
NDC80 kinetochore complex component.
   
 0.989
CDC16
Cell division cycle 16.
    
 0.987
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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