Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG7 | LOC108500571 | ENSLCOP00000017203 | ENSLCOP00000011905 | Autophagy related 7. | Ubiquitin. | 0.796 |
ATG7 | OASL | ENSLCOP00000017203 | ENSLCOP00000005696 | Autophagy related 7. | 2'-5'-oligoadenylate synthase 1-like. | 0.751 |
ATG7 | RNF141 | ENSLCOP00000017203 | ENSLCOP00000001638 | Autophagy related 7. | Ring finger protein 141. | 0.547 |
ATG7 | RPS27A | ENSLCOP00000017203 | ENSLCOP00000017561 | Autophagy related 7. | Ribosomal protein S27a. | 0.795 |
ATG7 | TRIP12 | ENSLCOP00000017203 | ENSLCOP00000006884 | Autophagy related 7. | Thyroid hormone receptor interactor 12. | 0.981 |
ATG7 | UBA3 | ENSLCOP00000017203 | ENSLCOP00000007580 | Autophagy related 7. | Ubiquitin like modifier activating enzyme 3. | 0.843 |
ATG7 | UBA5 | ENSLCOP00000017203 | ENSLCOP00000001587 | Autophagy related 7. | Ubiquitin like modifier activating enzyme 5. | 0.804 |
ATG7 | ZFAND4 | ENSLCOP00000017203 | ENSLCOP00000009617 | Autophagy related 7. | Zinc finger AN1-type containing 4. | 0.763 |
CPSF2 | CPSF3 | ENSLCOP00000012972 | ENSLCOP00000019679 | Cleavage and polyadenylation specific factor 2. | Cleavage and polyadenylation specific factor 3. | 0.999 |
CPSF2 | RNF141 | ENSLCOP00000012972 | ENSLCOP00000001638 | Cleavage and polyadenylation specific factor 2. | Ring finger protein 141. | 0.625 |
CPSF3 | CPSF2 | ENSLCOP00000019679 | ENSLCOP00000012972 | Cleavage and polyadenylation specific factor 3. | Cleavage and polyadenylation specific factor 2. | 0.999 |
CPSF3 | RNF141 | ENSLCOP00000019679 | ENSLCOP00000001638 | Cleavage and polyadenylation specific factor 3. | Ring finger protein 141. | 0.614 |
LOC108500571 | ATG7 | ENSLCOP00000011905 | ENSLCOP00000017203 | Ubiquitin. | Autophagy related 7. | 0.796 |
LOC108500571 | RNF141 | ENSLCOP00000011905 | ENSLCOP00000001638 | Ubiquitin. | Ring finger protein 141. | 0.556 |
LOC108500571 | RPS27A | ENSLCOP00000011905 | ENSLCOP00000017561 | Ubiquitin. | Ribosomal protein S27a. | 0.998 |
LOC108500571 | TRIP12 | ENSLCOP00000011905 | ENSLCOP00000006884 | Ubiquitin. | Thyroid hormone receptor interactor 12. | 0.996 |
LOC108500571 | UBA3 | ENSLCOP00000011905 | ENSLCOP00000007580 | Ubiquitin. | Ubiquitin like modifier activating enzyme 3. | 0.835 |
LOC108500571 | UBA5 | ENSLCOP00000011905 | ENSLCOP00000001587 | Ubiquitin. | Ubiquitin like modifier activating enzyme 5. | 0.790 |
LOC108500571 | ZFAND4 | ENSLCOP00000011905 | ENSLCOP00000009617 | Ubiquitin. | Zinc finger AN1-type containing 4. | 0.550 |
OASL | ATG7 | ENSLCOP00000005696 | ENSLCOP00000017203 | 2'-5'-oligoadenylate synthase 1-like. | Autophagy related 7. | 0.751 |
page 1 of 4