STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIK1Salt inducible kinase 1. (795 aa)    
Predicted Functional Partners:
ENSLCOP00000008991
annotation not available
    
 0.806
ENSLCOP00000008992
annotation not available
    
 0.806
PLA2G4A
Phospholipase A2 group IVA.
    
 0.648
EGR1
Early growth response 1.
   
 
 0.625
DUSP6
Dual specificity phosphatase 6.
    
 
 0.583
CASK
Calcium/calmodulin dependent serine protein kinase.
   
0.574
RIPK4
Receptor interacting serine/threonine kinase 4.
    
0.553
SLC39A3
Solute carrier family 39 member 3.
    
 0.539
RNASEL
Ribonuclease L.
    
 0.525
ENSLCOP00000022174
annotation not available
  
 
0.515
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.