STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF6Rac/Cdc42 guanine nucleotide exchange factor 6. (752 aa)    
Predicted Functional Partners:
PAK2
P21 (RAC1) activated kinase 2.
    
 0.987
GIT1
GIT ArfGAP 1.
    
 0.981
PAK1
P21 (RAC1) activated kinase 1.
    
 0.980
PAK3
P21 (RAC1) activated kinase 3.
    
 0.980
ENSLCOP00000004280
annotation not available
     
 0.975
ITSN2
Intersectin 2.
     
0.975
PAK5
P21 (RAC1) activated kinase 5.
    
 0.974
PAK6
P21 (RAC1) activated kinase 6.
    
 0.971
RAC2
Rac family small GTPase 2.
   
 0.963
RRAS2
RAS related 2.
    
 0.953
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.