STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCOP00000003980annotation not available (285 aa)    
Predicted Functional Partners:
MASP1
Mannan binding lectin serine peptidase 1.
    
 0.765
PLAU
Plasminogen activator, urokinase.
    
 0.756
THBD
Thrombomodulin.
    
 0.722
MASP2
Mannan binding lectin serine peptidase 2.
    
 0.712
PLAT
Plasminogen activator, tissue type.
    
  0.689
ENSLCOP00000004311
annotation not available
    
 0.631
C1S
Complement C1s.
    
 0.631
C1R
Complement C1r.
    
 0.595
COLEC11
Collectin subfamily member 11.
   
 0.593
COLEC10
Collectin subfamily member 10.
    
 0.578
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.