STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCOP00000004205annotation not available (198 aa)    
Predicted Functional Partners:
ENSLCOP00000001559
annotation not available
    
  0.758
ENSLCOP00000001564
annotation not available
    
  0.758
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.758
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.651
ENSLCOP00000010456
annotation not available
    
 0.598
TNR
Tenascin R.
    
  0.497
TNC
Tenascin C.
    
  0.497
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.491
ENSLCOP00000020019
annotation not available
    
  0.486
PINLYP
Phospholipase A2 inhibitor and LY6/PLAUR domain containing.
    
  0.485
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.