STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYDE2Synapse defective Rho GTPase homolog 2. (430 aa)    
Predicted Functional Partners:
RASL11B
RAS like family 11 member B.
    
 0.713
MYO9B
Myosin IXB.
    
0.698
MYO9A
Myosin IXA.
    
0.698
RHOG
Ras homolog family member G.
    
 0.618
RHOD
Ras homolog family member D.
    
 0.600
RHOF
Ras homolog family member F, filopodia associated.
    
 0.600
RHOA
Ras homolog family member A.
    
 0.599
RHOC
Ras homolog family member C.
    
 0.599
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.599
RND3
Rho family GTPase 3.
    
 0.572
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.