STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108493049Ribonuclease CL2-like. (143 aa)    
Predicted Functional Partners:
ENSLCOP00000001538
annotation not available
    
   0.644
ENSLCOP00000009989
annotation not available
    
   0.644
TRIM14
Tripartite motif containing 14.
    
   0.644
NLRC3
NLR family CARD domain containing 3.
    
   0.644
RNH1
Ribonuclease/angiogenin inhibitor 1.
    
   0.644
NOD1
Nucleotide binding oligomerization domain containing 1.
    
   0.644
NLRC5
NLR family CARD domain containing 5.
    
   0.644
NLRX1
NLR family member X1.
    
   0.615
CIITA
Class II major histocompatibility complex transactivator.
    
   0.615
CEP78
Centrosomal protein 78.
    
   0.594
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.