STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF14PHD finger protein 14. (940 aa)    
Predicted Functional Partners:
BRPF3
Bromodomain and PHD finger containing 3.
   
 
0.895
BRD1
Bromodomain containing 1.
   
 
0.824
BRPF1
Bromodomain and PHD finger containing 1.
   
 
0.824
HMG20A
High mobility group 20A.
   
 
 0.776
KAT6B
Lysine acetyltransferase 6B.
    
  0.710
KAT6A
Lysine acetyltransferase 6A.
    
  0.710
KAT7
Lysine acetyltransferase 7.
    
  0.703
SAMD13
Sterile alpha motif domain containing 13.
    
  0.644
ING3
Inhibitor of growth family member 3.
   
 
  0.617
PHF6
PHD finger protein 6.
    
 
 0.488
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.