STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCOP00000008380annotation not available (279 aa)    
Predicted Functional Partners:
BYSL
Bystin like.
   
  0.926
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.912
NOM1
Nucleolar protein with MIF4G domain 1.
   
  0.905
MAK16
MAK16 homolog.
   
   0.836
ENSLCOP00000002766
annotation not available
   
  0.824
SNU13
Small nuclear ribonucleoprotein 13.
   
  0.824
DQX1
DEAQ-box RNA dependent ATPase 1.
   
 0.816
DHX15
DEAH-box helicase 15.
   
 0.816
DHX32
DEAH-box helicase 32 (putative).
   
 0.816
SURF6
Surfeit 6.
   
 
 0.805
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.