STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GUF1GUF1 homolog, GTPase. (610 aa)    
Predicted Functional Partners:
MRPL13
Mitochondrial ribosomal protein L13.
 
 
 0.961
MRPL32
Mitochondrial ribosomal protein L32.
  
 
 0.950
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 
 0.949
RPL5
Ribosomal protein L5.
   
 
 0.946
MRPL20
Mitochondrial ribosomal protein L20.
  
 
 0.944
MRPS9
Mitochondrial ribosomal protein S9.
  
 
 0.943
RPL23
Ribosomal protein L23.
   
 
 0.942
RPL11
Ribosomal protein L11.
   
 
 0.942
RPS11
Ribosomal protein S11.
   
 
 0.941
RPS3
Ribosomal protein S3.
   
 
 0.941
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.