STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKTIPAKT interacting protein. (293 aa)    
Predicted Functional Partners:
HOOK3
Hook microtubule tethering protein 3.
    
 0.986
HOOK1
Hook microtubule tethering protein 1.
    
 0.970
FAM160A1
Family with sequence similarity 160 member A1.
    
 0.930
FAM160A2
Family with sequence similarity 160 member A2.
    
 0.930
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
    
 0.930
VPS41
VPS41 subunit of HOPS complex.
    
  0.928
FAM160B1
Family with sequence similarity 160 member B1.
    
 0.861
TNFSF13B
TNF superfamily member 13b.
    
   0.648
STX7
Syntaxin 7.
   
 
  0.631
STX12
Syntaxin 12.
   
 
  0.631
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.