STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COG3Component of oligomeric golgi complex 3. (832 aa)    
Predicted Functional Partners:
COG2
Component of oligomeric golgi complex 2.
   
 0.999
COG5
Component of oligomeric golgi complex 5.
   
 0.999
COG1
Component of oligomeric golgi complex 1.
   
 0.999
COG7
Component of oligomeric golgi complex 7.
    
 0.999
COG8
Component of oligomeric golgi complex 8.
    
 0.999
COG4
Component of oligomeric golgi complex 4.
    
 0.995
COG6
Component of oligomeric golgi complex 6.
   
 0.984
ENSLCOP00000010190
annotation not available
   
 0.984
SMIM7
Small integral membrane protein 7.
    
 0.981
TMEM115
Transmembrane protein 115.
     
 0.916
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.