STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STX12Syntaxin 12. (271 aa)    
Predicted Functional Partners:
YKT6
YKT6 v-SNARE homolog.
   
 0.982
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.982
VAMP8
Vesicle associated membrane protein 8.
    
 0.981
VAMP4
Vesicle associated membrane protein 4.
    
 0.979
NAPB
NSF attachment protein beta.
    
 0.977
GOSR1
Golgi SNAP receptor complex member 1.
   
 0.976
STX6
Syntaxin 6.
    
 0.966
STX8
Syntaxin 8.
    
 0.963
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
    
 0.959
VPS11
VPS11 core subunit of CORVET and HOPS complexes.
   
 0.954
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.