STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPC5Transient receptor potential cation channel subfamily C member 5. (974 aa)    
Predicted Functional Partners:
TRPC1
Transient receptor potential cation channel subfamily C member 1.
  
 
0.848
BMPR2
Bone morphogenetic protein receptor type 2.
    
 0.719
ENSLCOP00000002201
annotation not available
     
 0.687
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
     
 0.687
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
     
 0.687
PRKCA
Protein kinase C alpha type-like.
   
 0.653
PRKCB
Protein kinase C beta.
   
 0.653
STIM1
Stromal interaction molecule 1.
    
 0.648
TRPC3
Transient receptor potential cation channel subfamily C member 3.
  
 
0.623
LOC108507787
Short transient receptor potential channel 7-like.
  
 
0.615
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.