STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKD3Protein kinase D3. (890 aa)    
Predicted Functional Partners:
CREB5
cAMP responsive element binding protein 5.
     
 0.676
CREB1
cAMP responsive element binding protein 1.
     
 0.676
ITGB2
Integrin subunit beta 2.
    
  0.621
ITGB1
Integrin subunit beta 1.
    
  0.621
ATF7
Activating transcription factor 7.
     
 0.590
ATF2
Activating transcription factor 2.
     
 0.590
RAP1A
RAP1A, member of RAS oncogene family.
     
 0.588
RAP1B
RAP1B, member of RAS oncogene family.
     
 0.588
ITGB3
Integrin subunit beta 3.
    
  0.565
AKAP13
A-kinase anchoring protein 13.
    
 
 0.559
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.