STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIM1SIM bHLH transcription factor 1. (766 aa)    
Predicted Functional Partners:
ARNT
Aryl hydrocarbon receptor nuclear translocator.
    
 
0.808
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2.
    
 
0.808
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 
0.526
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
   
 
0.515
CLOCK
Clock circadian regulator.
    
 
0.512
NCOA2
Nuclear receptor coactivator 2.
    
 
0.512
NCOA3
Nuclear receptor coactivator 3.
    
 
0.512
NCOA1
Nuclear receptor coactivator 1.
    
 
0.512
NPAS2
Neuronal PAS domain protein 2.
    
 
0.512
ENSLCOP00000021879
annotation not available
    
 
0.512
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.