STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX6Chromobox 6. (405 aa)    
Predicted Functional Partners:
RNF2
Ring finger protein 2.
    
 0.981
CBX8
Chromobox 8.
    
0.969
PCGF1
Polycomb group ring finger 1.
    
 0.963
CBX4
Chromobox 4.
    
0.963
PCGF6
Polycomb group ring finger 6.
    
 0.956
CBX7
Chromobox 7.
     
0.955
PCGF3
Polycomb group ring finger 3.
    
 0.954
PCGF5
Polycomb group ring finger 5.
    
 0.951
EED
Embryonic ectoderm development.
    
 0.946
CBX2
Chromobox 2.
    
0.945
Your Current Organism:
Lepidothrix coronata
NCBI taxonomy Id: 321398
Other names: L. coronata, Pipra coronata, blue-crowned manakin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.