STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNOG_15721Uncharacterized protein. (448 aa)    
Predicted Functional Partners:
SNOG_05097
E3 ubiquitin-protein ligase.
    
 
 0.668
SNOG_12428
HECT domain-containing protein.
      
 0.636
SNOG_08356
Uncharacterized protein.
    
 
 0.599
SNOG_03100-2
Uncharacterized protein.
    
 
 0.581
SNOG_14122
WW domain-containing protein.
    
 
 0.497
SNOG_07558
PhoD_N domain-containing protein.
    
 
 0.497
SNOG_04547
Uncharacterized protein.
    
 
 0.497
SNOG_01960
PhoD_N domain-containing protein.
    
 
 0.497
SNOG_01959
Uncharacterized protein.
    
 
 0.497
SNOG_09371
Uncharacterized protein.
      
 0.487
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.