STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNOG_15529COG2 domain-containing protein. (289 aa)    
Predicted Functional Partners:
SNOG_11978
Uncharacterized protein.
   
 0.913
SNOG_03116
Cog4 domain-containing protein.
   
 0.888
COG6
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events (By similarity); Belongs to the COG6 family.
    
 0.878
SNOG_05702
Uncharacterized protein.
    
 0.830
SNOG_07627
t-SNARE coiled-coil homology domain-containing protein.
     
 0.691
SNOG_00248
t-SNARE coiled-coil homology domain-containing protein.
     
 0.688
SNOG_12831
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
     
 0.684
SNOG_06848
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 
 0.618
SNOG_14508
Uncharacterized protein.
   
 
 0.612
SNOG_06025
Uncharacterized protein.
     
 0.607
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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