STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNOG_09317Fork-head domain-containing protein. (739 aa)    
Predicted Functional Partners:
SNOG_10880
Uncharacterized protein.
    
 0.605
SNOG_11332
Uncharacterized protein.
    
   0.601
SNOG_05914
Uncharacterized protein.
    
 0.600
SNOG_15371
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
   0.580
SNOG_07764
MADS-box domain-containing protein.
    
 
 0.522
SNOG_02461
Ubiquitin carboxyl-terminal hydrolase.
    
 0.498
SNOG_15366
RFX-type winged-helix domain-containing protein.
    
 
 0.485
SNOG_14018
RRM domain-containing protein.
   
  
 0.473
SNOG_07773
Uncharacterized protein.
   
 0.473
SNOG_05130
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.461
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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