STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aguAAlpha-glucuronidase; Alpha-glucuronidase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Releases 4-O-methylglucuronic acid from xylan. Belongs to the glycosyl hydrolase 67 family. (836 aa)    
Predicted Functional Partners:
SNOG_07359
Tryptophan synthase.
  
  
 0.733
SNOG_01477
DOD-type homing endonuclease domain-containing protein.
    
 0.675
SNOG_10564
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
  
 0.673
SNOG_05877
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 
 0.658
SNOG_03274
Uncharacterized protein.
    
 0.656
SNOG_12636
PUA domain-containing protein.
  
 
 0.644
SNOG_08740
Zn(2)-C6 fungal-type domain-containing protein.
      
 0.635
SNOG_06144
Aminotran_1_2 domain-containing protein.
  
 
 0.629
SNOG_05049
Aminotran_5 domain-containing protein.
    
 0.599
SNOG_07423
Uncharacterized protein.
     
 0.562
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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