STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNOG_06793Uncharacterized protein. (119 aa)    
Predicted Functional Partners:
SNOG_15018
Uncharacterized protein.
   
 0.999
SNOG_12199
Uncharacterized protein.
   
 0.999
SNOG_04444
Uncharacterized protein.
   
 0.998
SNOG_02023
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
   
 0.998
SNOG_11979
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
   
 0.971
SNOG_15730
Uncharacterized protein.
   
 0.957
SNOG_14059
Uncharacterized protein.
   
 0.827
SNOG_16543
T-complex protein 1 subunit delta.
   
 0.801
SNOG_00325
Uncharacterized protein.
   
    0.784
SNOG_03582
Uncharacterized protein.
   
 0.760
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.