STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNOG_01905Uncharacterized protein. (362 aa)    
Predicted Functional Partners:
SNOG_04437
Uncharacterized protein.
    
 
 0.990
SNOG_09372
Uncharacterized protein.
    
 
 0.984
SNOG_00449
MPN domain-containing protein.
    
 0.968
SNOG_00716
WD_REPEATS_REGION domain-containing protein.
   
 0.965
SNOG_08693
Uncharacterized protein.
    
 0.963
SNOG_08770
Uncharacterized protein.
    
 0.945
SNOG_04637
Uncharacterized protein.
    
 0.925
SNOG_10893
Uncharacterized protein.
    
 0.913
SNOG_07183
Cir_N domain-containing protein.
    
 0.913
SNOG_04746
Tr-type G domain-containing protein.
   
 0.907
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.