STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL11545.1Tripartite ATP-independent transporter, DctQ component. (173 aa)    
Predicted Functional Partners:
SDL11517.1
TRAP transporter, DctM subunit.
 
  0.964
SDL22214.1
TRAP transporter, DctM subunit.
  
  0.854
SDL77390.1
TRAP transporter, DctM subunit.
  
  0.854
SDL26258.1
TRAP transporter, DctM subunit.
  
  0.852
SDM33918.1
TRAP transporter, DctM subunit.
  
  0.852
SDM34248.1
TRAP transporter, DctM subunit.
  
  0.850
SDL77461.1
C4-dicarboxylate-binding protein DctP.
  
    0.818
SDL26343.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
    0.817
SDM33842.1
Extracellular solute-binding protein, family 7.
  
    0.817
SDL22276.1
Tripartite ATP-independent transporter solute receptor, DctP family.
  
    0.816
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.