STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL59458.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
SDL59415.1
Type IV pilus assembly protein PilM.
  
 0.959
SDL59498.1
Type IV pilus assembly protein PilO.
  
 
 0.951
SDL52468.1
Tfp pilus assembly protein, ATPase PilM.
  
 0.826
SDL58879.1
Type IV pilus assembly protein PilM.
  
 0.826
SDL52288.1
Hypothetical protein.
  
 
 0.795
SDL59375.1
Type IV pilus assembly protein PilC.
   
 
 0.689
SDL59544.1
Hypothetical protein.
       0.668
SDL59301.1
Type IV pilus assembly protein PilB.
  
 
 0.629
SDL59590.1
Type II secretory pathway component GspD/PulD (secretin); Belongs to the bacterial secretin family.
     
 0.613
SDL43045.1
General secretion pathway protein E.
  
 
 0.541
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.