STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL80173.1Peptide/nickel transport system substrate-binding protein. (518 aa)    
Predicted Functional Partners:
SDL80005.1
Peptide/nickel transport system permease protein.
 0.915
SDL80049.1
Peptide/nickel transport system permease protein.
 0.910
SDM06717.1
Peptide/nickel transport system permease protein.
 0.881
SDM06753.1
Peptide/nickel transport system permease protein.
 0.861
SDL31936.1
Peptide/nickel transport system permease protein.
 0.852
SDL31972.1
Peptide/nickel transport system permease protein.
 0.841
SDM33579.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
    0.838
SDL26224.1
Peptide/nickel transport system permease protein.
 
 0.828
SDL80090.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.621
SDL80130.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.616
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.