STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL91216.1Glutaredoxin. (82 aa)    
Predicted Functional Partners:
SDL06193.1
Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
 0.967
msrB
Peptide methionine sulfoxide reductase msrA/msrB.
  
 
 0.870
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.749
SDL86200.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.728
SDL62418.1
Hypothetical protein.
  
  
 0.720
SDM01180.1
Methionine synthase I (cobalamin-dependent), methyltransferase domain.
  
 
  0.668
SDM12279.1
Cu+-exporting ATPase.
   
 
 0.630
SDL80598.1
Thioredoxin reductase (NADPH).
  
 0.591
SDL91274.1
Cold shock protein (beta-ribbon, CspA family).
  
  
 0.519
SDM24524.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.513
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.