STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL97931.1Threonine dehydratase. (323 aa)    
Predicted Functional Partners:
SDM33579.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.943
SDM14065.1
Acetolactate synthase, small subunit.
  
 
 0.922
SDM34993.1
L-threonine aldolase.
   
 
 0.870
SDM01180.1
Methionine synthase I (cobalamin-dependent), methyltransferase domain.
  
 0.844
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.830
SDM14317.1
Branched chain amino acid aminotransferase apoenzyme.
  
 
 0.824
SDM14027.1
Acetolactate synthase, large subunit.
  
 0.811
ilvD-2
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.806
SDL22544.1
L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
 
 
0.778
SDL80848.1
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
 
 0.772
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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