Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL08179.1 | SDL10813.1 | SAMN04488692_101107 | SAMN04488692_101178 | acetyl-CoA decarbonylase/synthase beta subunit. | Predicted RNA-binding protein. | 0.832 |
SDL08179.1 | SDL97617.1 | SAMN04488692_101107 | SAMN04488692_1136 | acetyl-CoA decarbonylase/synthase beta subunit. | Protein of unknown function. | 0.409 |
SDL10813.1 | SDL08179.1 | SAMN04488692_101178 | SAMN04488692_101107 | Predicted RNA-binding protein. | acetyl-CoA decarbonylase/synthase beta subunit. | 0.832 |
SDL10813.1 | SDL97617.1 | SAMN04488692_101178 | SAMN04488692_1136 | Predicted RNA-binding protein. | Protein of unknown function. | 0.785 |
SDL97617.1 | SDL08179.1 | SAMN04488692_1136 | SAMN04488692_101107 | Protein of unknown function. | acetyl-CoA decarbonylase/synthase beta subunit. | 0.409 |
SDL97617.1 | SDL10813.1 | SAMN04488692_1136 | SAMN04488692_101178 | Protein of unknown function. | Predicted RNA-binding protein. | 0.785 |
SDL97617.1 | SDL97701.1 | SAMN04488692_1136 | SAMN04488692_1138 | Protein of unknown function. | Di-and tricarboxylate transporter. | 0.484 |
SDL97617.1 | SDM16318.1 | SAMN04488692_1136 | SAMN04488692_11918 | Protein of unknown function. | Hypothetical protein. | 0.498 |
SDL97617.1 | hisC | SAMN04488692_1136 | SAMN04488692_1137 | Protein of unknown function. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.773 |
SDL97701.1 | SDL97617.1 | SAMN04488692_1138 | SAMN04488692_1136 | Di-and tricarboxylate transporter. | Protein of unknown function. | 0.484 |
SDL97701.1 | hisC | SAMN04488692_1138 | SAMN04488692_1137 | Di-and tricarboxylate transporter. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.486 |
SDM16318.1 | SDL97617.1 | SAMN04488692_11918 | SAMN04488692_1136 | Hypothetical protein. | Protein of unknown function. | 0.498 |
hisC | SDL97617.1 | SAMN04488692_1137 | SAMN04488692_1136 | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Protein of unknown function. | 0.773 |
hisC | SDL97701.1 | SAMN04488692_1137 | SAMN04488692_1138 | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Di-and tricarboxylate transporter. | 0.486 |