STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM02843.11,3-propanediol dehydrogenase. (390 aa)    
Predicted Functional Partners:
SDM33579.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.959
SDL94978.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
 
 0.707
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.614
SDL60109.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.607
SDL50025.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.606
SDL30380.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.601
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 
 0.599
SDM02813.1
1,3-propanediol dehydrogenase.
 
    
0.598
SDL06234.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.585
SDL99561.1
NADPH-dependent glutamate synthase beta chain.
    
 0.569
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.