STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM05154.1Cobalt-precorrin 5A acetaldehyde-lyase. (382 aa)    
Predicted Functional Partners:
SDM05117.1
precorrin-3B C17-methyltransferase.
 
 0.999
SDM05189.1
Cobalt-precorrin 4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 0.999
SDM05081.1
precorrin-6A/cobalt-precorrin-6A reductase.
  
 0.998
SDM05227.1
Precorrin-2/cobalt-factor-2 C20-methyltransferase.
 
 0.998
cbiD
Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
 
 0.998
SDM05376.1
precorrin-8X methylmutase.
 
 0.991
SDM05263.1
cobalt-precorrin-6B (C15)-methyltransferase.
 
  
 0.982
SDL78015.1
GHMP kinases N terminal domain-containing protein.
 
  
 0.980
SDM05300.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.979
SDM05008.1
Precorrin-2 dehydrogenase.
   
 0.957
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.