STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM11884.1NADP-reducing hydrogenase subunit HndB. (121 aa)    
Predicted Functional Partners:
SDL30333.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
 
 0.964
SDM38779.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 0.958
SDM11850.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   
 0.939
SDM12073.1
Iron only hydrogenase large subunit, C-terminal domain.
 
 
 0.917
SDM11919.1
NADP-reducing hydrogenase subunit HndC.
 
  
 0.889
SDM12012.1
Hypothetical protein.
 
   
 0.881
SDM12044.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
   
 0.878
SDM12101.1
DRTGG domain-containing protein.
 
   
 0.869
SDM12133.1
Hypothetical protein.
 
   
 0.869
SDM11819.1
NADP-reducing hydrogenase subunit HndA.
 
 0.868
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
Server load: low (18%) [HD]