STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM11983.1NADP-reducing hydrogenase subunit HndD. (573 aa)    
Predicted Functional Partners:
SDL50025.1
NADH-quinone oxidoreductase subunit F.
 
 
 0.996
SDL30380.1
NADH-quinone oxidoreductase subunit F.
 
 0.992
SDM11951.1
4Fe-4S binding domain-containing protein.
 
 
 0.992
SDM11919.1
NADP-reducing hydrogenase subunit HndC.
 
 
 0.988
SDL55808.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
 
 0.985
SDL99599.1
NADH-quinone oxidoreductase subunit F.
 
 
 0.985
SDL55731.1
Formate dehydrogenase (NADP) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.935
SDM11819.1
NADP-reducing hydrogenase subunit HndA.
 
 0.812
SDL51816.1
Biotin synthase.
 
  
 0.763
SDL30430.1
NADH-quinone oxidoreductase subunit E.
 0.760
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.