STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM23034.1Fumarate hydratase subunit beta. (184 aa)    
Predicted Functional Partners:
SDM22999.1
Fumarase, class I alpha subunit.
 
 0.995
SDL72094.1
Fumarase, class I alpha subunit.
 
 0.991
SDM23077.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
 
 
 0.937
SDM33579.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.800
SDL79615.1
Thiol-driven fumarate reductase, flavoprotein subunit.
  
 
 0.753
argH
Argininosuccinate lyase.
    
 0.681
SDM22957.1
Aspartate ammonia-lyase.
    
 0.672
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.661
SDL79656.1
Fumarate reductase iron-sulfur subunit.
  
 
 0.639
SDL31693.1
FAD dependent oxidoreductase.
  
 
 0.619
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.