STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM45249.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (283 aa)    
Predicted Functional Partners:
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 0.990
SDM33579.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.956
SDL17288.1
Ribose-5-phosphate isomerase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 0.900
SDL89875.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 0.801
SDL89751.1
[acyl-carrier-protein] S-malonyltransferase.
  
 0.784
SDM18437.1
Cyclic nucleotide-binding domain-containing protein.
   
 0.758
SDL43130.1
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
   
 0.757
SDL37969.1
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
   
 0.757
SDL86200.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.742
SDM12375.1
Beta galactosidase small chain.
  
 
 0.739
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.