STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM52058.1Tripartite-type tricarboxylate transporter, receptor component TctC. (332 aa)    
Predicted Functional Partners:
SDM52150.1
Putative tricarboxylic transport membrane protein.
  
 0.886
SDM09790.1
Putative tricarboxylic transport membrane protein.
  
 0.856
SDM23320.1
Putative tricarboxylic transport membrane protein.
  
 0.856
SDM41819.1
Putative tricarboxylic transport membrane protein.
  
 0.856
SDL31254.1
Putative tricarboxylic transport membrane protein.
  
 0.853
SDM23281.1
Tripartite tricarboxylate transporter TctB family protein.
  
  
 0.505
SDM41780.1
Tripartite tricarboxylate transporter TctB family protein.
  
  
 0.505
SDM52096.1
Tripartite tricarboxylate transporter TctB family protein.
       0.410
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.