STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_030891Glucose-6-phosphate isomerase; Belongs to the GPI family. (646 aa)    
Predicted Functional Partners:
PHYPA_022937
Probable ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
 0.989
PHYPA_026255
Probable ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
 0.989
PHYPA_019242
Uncharacterized protein.
  
 0.988
PHYPA_012308
Uncharacterized protein.
  
 0.988
PHYPA_021287
Predicted protein; Belongs to the phosphohexose mutase family.
  
 0.987
PHYPA_029813
Predicted protein; Belongs to the phosphohexose mutase family.
  
 0.987
PHYPA_013687
TRANSKETOLASE_1 domain-containing protein.
  
 0.983
PHYPA_013704
TRANSKETOLASE_1 domain-containing protein.
  
 0.983
PHYPA_012231
Transket_pyr domain-containing protein.
  
 0.983
PHYPA_007081
TRANSKETOLASE_1 domain-containing protein.
  
 0.983
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.