STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_029597G-patch domain-containing protein. (675 aa)    
Predicted Functional Partners:
PHYPA_016418
Uncharacterized protein.
    
 
 0.866
PHYPA_023073
Predicted protein.
   
 
 0.794
PHYPA_017519
Predicted protein.
   
 
 0.794
PHYPA_005021
Predicted protein.
   
 
 0.794
PHYPA_008816
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.742
PHYPA_007532
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 0.742
PHYPA_014350
Peptidyl-prolyl cis-trans isomerase.
    
 0.656
PHYPA_025487
Peptidyl-prolyl cis-trans isomerase.
    
 0.656
PHYPA_026593
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.638
PHYPA_007894
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.638
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (30%) [HD]