STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_027315Uncharacterized protein. (426 aa)    
Predicted Functional Partners:
PHYPA_015553
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
  
 
0.958
PHYPA_009927
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
  
 
0.958
PHYPA_022574
Uncharacterized protein.
  
  
 
0.900
PHYPA_020008
Protein kinase domain-containing protein.
  
0.681
PHYPA_027999
Predicted protein.
    
 0.619
PHYPA_030690
Protein kinase domain-containing protein.
   
 0.618
PHYPA_030689
Protein kinase domain-containing protein.
   
 0.618
PHYPA_030692
Protein kinase domain-containing protein.
   
 0.618
PHYPA_027957
Protein kinase domain-containing protein.
   
 0.618
PHYPA_026491
Protein kinase domain-containing protein.
   
 0.618
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.