STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_026432FAD-binding PCMH-type domain-containing protein. (527 aa)    
Predicted Functional Partners:
PHYPA_020032
Uncharacterized protein; Belongs to the GST superfamily.
     
 0.900
PHYPA_025492
Predicted protein; Belongs to the GST superfamily.
     
 0.900
DHAR1
DHAR class glutathione S-transferase; Belongs to the GST superfamily.
     
 0.900
PHYPA_010721
SGL domain-containing protein.
  
 
 0.783
PHYPA_006891
SGL domain-containing protein.
  
 
 0.783
PHYPA_003826
SGL domain-containing protein.
  
 
 0.783
PHYPA_025455
Malate synthase; Belongs to the malate synthase family.
  
 
 0.691
PHYPA_024582
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
     
 0.683
PHYPA_001206
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
     
  0.683
PHYPA_001884
Predicted protein; Belongs to the peroxidase family.
     
  0.683
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.