Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHYPA_000130 | PHYPA_004187 | A0A2K1L6Q0 | A0A2K1KTS9 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Uncharacterized protein. | 0.990 |
PHYPA_000130 | PHYPA_004837 | A0A2K1L6Q0 | A0A2K1KVN8 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.999 |
PHYPA_000130 | PHYPA_009458 | A0A2K1L6Q0 | A0A2K1KH43 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Uncharacterized protein. | 0.995 |
PHYPA_000130 | PHYPA_009791 | A0A2K1L6Q0 | A9SYB7 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Predicted protein. | 0.998 |
PHYPA_000130 | PHYPA_019788 | A0A2K1L6Q0 | A9SQF1 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.980 |
PHYPA_000130 | PHYPA_020773 | A0A2K1L6Q0 | A9SR48 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Predicted protein. | 0.983 |
PHYPA_000130 | PHYPA_023151 | A0A2K1L6Q0 | A0A2K1J146 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.998 |
PHYPA_000130 | PHYPA_024715 | A0A2K1L6Q0 | A0A2K1IU14 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.992 |
PHYPA_000130 | PHYPA_025562 | A0A2K1L6Q0 | A0A2K1IQ84 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.996 |
PHYPA_000130 | PHYPA_028015 | A0A2K1L6Q0 | A9TR32 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.993 |
PHYPA_004187 | PHYPA_000130 | A0A2K1KTS9 | A0A2K1L6Q0 | Uncharacterized protein. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.990 |
PHYPA_004187 | PHYPA_004837 | A0A2K1KTS9 | A0A2K1KVN8 | Uncharacterized protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.996 |
PHYPA_004187 | PHYPA_009458 | A0A2K1KTS9 | A0A2K1KH43 | Uncharacterized protein. | Uncharacterized protein. | 0.994 |
PHYPA_004187 | PHYPA_009791 | A0A2K1KTS9 | A9SYB7 | Uncharacterized protein. | Predicted protein. | 0.969 |
PHYPA_004187 | PHYPA_019788 | A0A2K1KTS9 | A9SQF1 | Uncharacterized protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.988 |
PHYPA_004187 | PHYPA_020773 | A0A2K1KTS9 | A9SR48 | Uncharacterized protein. | Predicted protein. | 0.997 |
PHYPA_004187 | PHYPA_023151 | A0A2K1KTS9 | A0A2K1J146 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.998 |
PHYPA_004187 | PHYPA_024715 | A0A2K1KTS9 | A0A2K1IU14 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.989 |
PHYPA_004187 | PHYPA_025562 | A0A2K1KTS9 | A0A2K1IQ84 | Uncharacterized protein. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.984 |
PHYPA_004187 | PHYPA_028015 | A0A2K1KTS9 | A9TR32 | Uncharacterized protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.996 |
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