STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_024012Deacetylase sirtuin-type domain-containing protein. (494 aa)    
Predicted Functional Partners:
PHYPA_022480
NAD-dependent protein deacylase; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.
  
0.956
PHYPA_022457
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
    
 0.945
PHYPA_025501
CTP_transf_like domain-containing protein.
   
 0.926
PHYPA_017322
CTP_transf_like domain-containing protein.
   
 0.926
PHYPA_014370
CTP_transf_like domain-containing protein.
   
 0.926
PHYPA_004557
CTP_transf_like domain-containing protein.
   
 0.926
PHYPA_029891
Uncharacterized protein.
  
 
 0.920
PHYPA_022634
Uncharacterized protein.
  
 
 0.920
PHYPA_014279
Uncharacterized protein.
  
 
 0.920
PHYPA_008456
Uncharacterized protein.
  
 
 0.920
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.