STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_022100Uncharacterized protein. (1099 aa)    
Predicted Functional Partners:
PHYPA_016939
CS domain-containing protein.
    
 0.641
PHYPA_004075
CS domain-containing protein.
    
 0.641
PHYPA_004073
CS domain-containing protein.
    
 0.641
PHYPA_006715
Predicted protein.
    
 0.641
PHYPA_024148
HATPase_c domain-containing protein.
    
 0.526
PHYPA_019673
HATPase_c domain-containing protein.
    
 0.526
PHYPA_019906
SH3 domain-containing protein.
    
 0.526
PHYPA_016601
HATPase_c domain-containing protein.
    
 0.526
PHYPA_012960
Uncharacterized protein.
    
 0.526
PHYPA_005588
HATPase_c domain-containing protein.
    
 0.526
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.