STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_020472Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
PHYPA_025488
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
  0.634
PHYPA_014353
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
  0.634
PHYPA_021772
t-SNARE coiled-coil homology domain-containing protein.
   
 
  0.617
PHYPA_001511
t-SNARE coiled-coil homology domain-containing protein.
   
 
  0.617
SYP3A1
Qa-SNARE, SYP3/Sed5p/Syntaxin 5-type.
   
 
  0.469
SYP3A2
Qa-SNARE, SYP3/Sed5p/Syntaxin 5-type; Belongs to the syntaxin family.
   
 
  0.469
PHYPA_015139
Predicted protein.
      
 0.459
PHYPA_022755
Predicted protein.
   
  
 0.451
PHYPA_001972
Predicted protein.
      
 0.446
PHYPA_011398
UBA domain-containing protein.
   
  
 0.438
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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